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Ideas tagged with bioinformatics
Bionode - Modular and universal bioinformatics
> Highly reusable tools and code for bioinformatics, focused on * [Node.js](http://nodejs.org)/JavaScript to be *"write once, run anywhere"* * Node.js [Streams](https://nodejs.org/api/stream.html) and [Events](https://nodejs.org/api/events.html) for scalable and reactive pipelines * CLI for e...
By Bruno Vieira
The Growing Need for Domain-Driven Languages
With computer science permeating every research disciple such that even rudimentary computational skills are now required for most research careers, it should not be the case that one needs advanced knowledge of computer science to be effective in their field. If we take Bioinformatics as an ...
Docker containers with embedded R packages and domain-specific tools
R packages are collections of functions, documentations, tests, sample data, and dependency declarations, which come together to promote modularity, reproducibility, and adherence to good coding practices. Containerization using technologies such as Docker allow for building a specific computing...
Gender Commonality in the Upregulated Transcriptome of Patients with Ischemic Stroke
The present study systematically searched the Gene Expression Omnibus (GEO) DataSets for and retrieved the GSE22255 dataset that included transcriptomic data from Ischemic Stroke patients. This was an expression profiling by array using peripheral blood mononuclear cell samples. The mRNAs with a...
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